Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_04315 | Not Available | Negative | 904403 - 905233 | 30491.8 |
| phosphate starvation-inducible protein phoh | DER08_04320 | Not Available | Positive | 905409 - 906359 | 35910.1 |
| haloacid dehalogenase | DER08_04325 | Not Available | Positive | 906380 - 907192 | 30810.9 |
| s9 family peptidase | DER08_04330 | Not Available | Positive | 907204 - 909549 | 89933.3 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DER08_04335 | Not Available | Positive | 909609 - 910562 | 36092.9 |
| peptidase m42 | DER08_04340 | Not Available | Negative | 910725 - 911813 | 40398.4 |
| duf4294 domain-containing protein | DER08_04345 | Not Available | Positive | 911896 - 912561 | 25791.3 |
| hypothetical protein | DER08_04350 | Not Available | Negative | 912746 - 913930 | 45260.2 |
| acyl-coa thioesterase | DER08_04355 | Not Available | Negative | 913969 - 914481 | 18548.5 |
| doxx family protein | DER08_04360 | Not Available | Negative | 914491 - 914874 | 14330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
