Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_04265 | Not Available | Positive | 895942 - 896487 | 21488.3 |
| hypothetical protein | DER08_04270 | Not Available | Positive | 896655 - 896876 | 8543.04 |
| hypothetical protein | DER08_04275 | Not Available | Positive | 896877 - 897263 | 14782.2 |
| hypothetical protein | DER08_04280 | Not Available | Negative | 897266 - 897976 | 27093.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DER08_04285 | Not Available | Negative | 897991 - 899403 | 51839.3 |
| universal stress protein uspa | DER08_04290 | Not Available | Positive | 899570 - 900406 | 31462.8 |
| dna polymerase iii subunit beta | DER08_04295 | Not Available | Negative | 900474 - 901592 | 40965.2 |
| gliding motility-associated abc transporter substrate-binding protein gldg | DER08_04300 | Not Available | Negative | 901677 - 903362 | 63697.9 |
| gliding motility-associated abc transporter permease subunit gldf | DER08_04305 | Not Available | Negative | 903362 - 904087 | 26624.1 |
| antibiotic biosynthesis monooxygenase | DER08_04310 | Not Available | Negative | 904099 - 904395 | 11931.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
