Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltransferase | DER08_04215 | Not Available | Negative | 887897 - 889579 | 61184.8 |
| duf479 domain-containing protein | DER08_04220 | Not Available | Negative | 889576 - 890160 | 23052.2 |
| phosphoglucosamine mutase | DER08_04225 | Not Available | Positive | 890310 - 891698 | 50008.2 |
| lipid a biosynthesis acyltransferase | DER08_04230 | Not Available | Negative | 891751 - 892620 | 34503.2 |
| rhomboid family intramembrane serine protease | DER08_04235 | Not Available | Positive | 892735 - 893373 | 23768.0 |
| Trna-tyr | Not Available | Not Available | Positive | 893416 - 893499 | Not Available |
| tlpa family protein disulfide reductase | DER08_04245 | Not Available | Negative | 893674 - 893952 | 10299.5 |
| thiol:disulfide interchange protein | DER08_04250 | Not Available | Negative | 894079 - 894831 | 27044.6 |
| molecular chaperone dnaj | DER08_04255 | Not Available | Negative | 895023 - 895463 | 16853.2 |
| hypothetical protein | DER08_04260 | Not Available | Negative | 895608 - 895853 | 9364.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
