Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_04165 | Not Available | Positive | 871039 - 871773 | 26151.7 |
| hypothetical protein | DER08_04170 | Not Available | Negative | 871846 - 874896 | 100671.0 |
| hypothetical protein | DER08_04175 | Not Available | Negative | 874908 - 875534 | 23609.7 |
| hypothetical protein | DER08_04180 | Not Available | Negative | 875534 - 876013 | 17608.2 |
| transketolase | DER08_04185 | Not Available | Negative | 876200 - 878608 | 89648.8 |
| aminopeptidase | DER08_04190 | Not Available | Negative | 878783 - 881530 | 107195.0 |
| tigr00730 family rossman fold protein | DER08_04195 | Not Available | Negative | 881681 - 882403 | 26751.1 |
| excinuclease abc subunit uvra | DER08_04200 | Not Available | Negative | 882463 - 885294 | 105440.0 |
| chloride channel protein | DER08_04205 | Not Available | Negative | 885408 - 887192 | 65119.7 |
| dna alkylation repair protein | DER08_04210 | Not Available | Negative | 887222 - 887893 | 26316.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
