Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four helix bundle protein | DER08_04065 | Not Available | Negative | 843364 - 843732 | 13957.1 |
| tryptophan synthase subunit beta | DER08_04070 | Not Available | Negative | 843811 - 844992 | 43172.8 |
| n-(5'-phosphoribosyl)anthranilate isomerase | DER08_04075 | Not Available | Negative | 845005 - 845628 | 23645.7 |
| indole-3-glycerol phosphate synthase trpc | DER08_04080 | Not Available | Negative | 845631 - 846413 | 28945.0 |
| four helix bundle protein | DER08_04085 | Not Available | Negative | 846457 - 846822 | 14113.0 |
| anthranilate phosphoribosyltransferase | DER08_04090 | Not Available | Negative | 846860 - 847852 | 35823.2 |
| aminodeoxychorismate/anthranilate synthase component ii | DER08_04095 | Not Available | Negative | 847862 - 848428 | 21224.1 |
| anthranilate synthase component i | DER08_04100 | Not Available | Negative | 848440 - 849840 | 52892.3 |
| atp-dependent chaperone clpb | DER08_04105 | Not Available | Negative | 850111 - 852714 | 96885.8 |
| bacillithiol system redox-active protein ytxj | DER08_04110 | Not Available | Positive | 852860 - 853249 | 14728.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
