Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phna protein | DER08_04015 | Not Available | Negative | 836279 - 836857 | 21588.7 |
| pantetheine-phosphate adenylyltransferase | DER08_04020 | Not Available | Negative | 836922 - 837377 | 17299.1 |
| d-alanine--d-alanine ligase | DER08_04025 | Not Available | Negative | 837388 - 838359 | 35790.0 |
| pasta domain-containing protein | DER08_04030 | Not Available | Positive | 838589 - 839209 | 23106.7 |
| rna pseudouridine synthase | DER08_04035 | Not Available | Positive | 839199 - 840236 | 39378.1 |
| hypothetical protein | DER08_04040 | Not Available | Negative | 840259 - 840588 | 12187.1 |
| hypothetical protein | DER08_04045 | Not Available | Negative | 840581 - 840940 | 13657.3 |
| hypothetical protein | DER08_04050 | Not Available | Negative | 841275 - 841655 | 14345.4 |
| peroxide stress protein yaaa | DER08_04055 | Not Available | Positive | 841773 - 842531 | 28733.9 |
| tryptophan synthase subunit alpha | DER08_04060 | Not Available | Negative | 842535 - 843302 | 28129.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
