Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | DER08_03965 | Not Available | Negative | 823487 - 824875 | 49272.6 |
| antibiotic abc transporter atp-binding protein | DER08_03970 | Not Available | Negative | 825014 - 826768 | 66947.9 |
| trna pseudouridine(38-40) synthase trua | DER08_03975 | Not Available | Negative | 826778 - 827521 | 28627.0 |
| yfce family phosphodiesterase | DER08_03980 | Not Available | Positive | 827655 - 828152 | 18671.6 |
| two-component sensor histidine kinase | DER08_03985 | Not Available | Negative | 828159 - 829841 | 65101.4 |
| dna-binding response regulator | DER08_03990 | Not Available | Negative | 829864 - 830526 | 24696.1 |
| duf4293 domain-containing protein | DER08_03995 | Not Available | Negative | 830662 - 831075 | 15501.6 |
| transcription termination factor rho | DER08_04000 | Not Available | Positive | 831259 - 832944 | 62478.4 |
| hypothetical protein | DER08_04005 | Not Available | Negative | 833001 - 834731 | 66335.4 |
| helicase | DER08_04010 | Not Available | Positive | 834845 - 836188 | 50634.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
