Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbb3-type cytochrome oxidase assembly protein ccos | DER08_00355 | Not Available | Positive | 75374 - 75565 | 7215.8 |
| cytochrome c oxidase cbb3 | DER08_00360 | Not Available | Positive | 75568 - 77745 | 82346.5 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | DER08_00365 | Not Available | Positive | 77755 - 77934 | 6889.64 |
| cytochrome c oxidase subunit iii | DER08_00370 | Not Available | Positive | 77952 - 78851 | 33522.8 |
| cytochrome c oxidase accessory protein ccog | DER08_00375 | Not Available | Positive | 78911 - 80329 | 54179.2 |
| cytochrome c oxidase cbb3 | DER08_00380 | Not Available | Positive | 80351 - 80800 | 17198.8 |
| hypothetical protein | DER08_00385 | Not Available | Positive | 80807 - 81508 | 25593.6 |
| oxygen-independent coproporphyrinogen iii oxidase | DER08_00390 | Not Available | Negative | 81512 - 82876 | 52538.8 |
| duf349 domain-containing protein | DER08_00395 | Not Available | Negative | 83009 - 84952 | 76247.7 |
| shikimate dehydrogenase | DER08_00400 | Not Available | Negative | 85166 - 85912 | 28265.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
