Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l19 | DER08_03915 | Not Available | Negative | 813746 - 814099 | 13572.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DER08_03920 | Not Available | Negative | 814225 - 814902 | 25370.4 |
| peptidylprolyl isomerase | DER08_03925 | Not Available | Positive | 815157 - 816089 | 33502.5 |
| carboxypeptidase | DER08_03930 | Not Available | Positive | 816246 - 817787 | 57782.9 |
| dna-binding protein | DER08_03935 | Not Available | Negative | 817845 - 818225 | 15069.4 |
| abc transporter | DER08_03940 | Not Available | Negative | 818292 - 820070 | 66630.8 |
| transcription antitermination factor nusb | DER08_03945 | Not Available | Positive | 820293 - 821204 | 35205.4 |
| preprotein translocase subunit yajc | DER08_03950 | Not Available | Positive | 821233 - 821505 | 10101.7 |
| peptidase t | DER08_03955 | Not Available | Negative | 821555 - 822796 | 45959.1 |
| endo-arabinase | DER08_03960 | Not Available | Negative | 822898 - 823347 | 16883.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
