Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_03865 | Not Available | Negative | 801517 - 801774 | 9660.78 |
| duf1456 domain-containing protein | DER08_03870 | Not Available | Negative | 801774 - 802232 | 17550.2 |
| alpha-mannosidase | DER08_03875 | Not Available | Negative | 802310 - 803125 | 30827.2 |
| dipeptide epimerase | DER08_03880 | Not Available | Negative | 803146 - 804156 | 37544.5 |
| excinuclease abc subunit b | DER08_03885 | Not Available | Negative | 804168 - 806159 | 75956.7 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | DER08_03890 | Not Available | Negative | 806240 - 807193 | 36053.1 |
| thiamine diphosphokinase | DER08_03895 | Not Available | Negative | 807230 - 807892 | 24935.8 |
| duf4249 domain-containing protein | DER08_03900 | Not Available | Negative | 807927 - 808748 | 30518.9 |
| hypothetical protein | DER08_03905 | Not Available | Negative | 808754 - 811135 | 89575.2 |
| nadp-dependent isocitrate dehydrogenase | DER08_03910 | Not Available | Negative | 811261 - 813483 | 80173.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
