Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramic acid 6-phosphate etherase | DER08_03715 | Not Available | Negative | 767389 - 768210 | 29282.3 |
| helicase | DER08_03720 | Not Available | Negative | 768226 - 768606 | 14108.2 |
| zip family metal transporter | DER08_03725 | Not Available | Negative | 768623 - 769291 | 24830.3 |
| sam-dependent methyltransferase | DER08_03730 | Not Available | Negative | 769291 - 770055 | 29607.8 |
| rna methyltransferase | DER08_03735 | Not Available | Positive | 770205 - 771374 | 44322.8 |
| hypothetical protein | DER08_03740 | Not Available | Positive | 771387 - 771620 | 8936.29 |
| duf1801 domain-containing protein | DER08_03745 | Not Available | Positive | 771666 - 772079 | 15808.2 |
| hypothetical protein | DER08_03750 | Not Available | Negative | 772094 - 772834 | 28214.7 |
| hypothetical protein | DER08_03755 | Not Available | Negative | 772806 - 773348 | 19939.8 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DER08_03760 | Not Available | Negative | 773353 - 774765 | 53994.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
