Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | DER08_03565 | Not Available | Negative | 734160 - 736943 | 103927.0 |
| rna polymerase subunit sigma-24 | DER08_03570 | Not Available | Positive | 737218 - 737802 | 22386.1 |
| aldehyde dehydrogenase family protein | DER08_03575 | Not Available | Negative | 738041 - 739570 | 55421.5 |
| duf1338 domain-containing protein | DER08_03580 | Not Available | Negative | 739576 - 740478 | 34960.4 |
| saccharopine dehydrogenase | DER08_03585 | Not Available | Negative | 740487 - 741566 | 39928.9 |
| endonuclease iii | DER08_03590 | Not Available | Negative | 741708 - 742352 | 24357.8 |
| thioredoxin-dependent thiol peroxidase | DER08_03595 | Not Available | Positive | 742410 - 742862 | 16795.9 |
| nicotinate-nucleotide adenylyltransferase | DER08_03600 | Not Available | Negative | 742928 - 744388 | 56222.9 |
| mbl fold metallo-hydrolase | DER08_03605 | Not Available | Positive | 744618 - 745382 | 29072.8 |
| hypothetical protein | DER08_03610 | Not Available | Positive | 745391 - 745891 | 19477.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
