Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_03510 | Not Available | Negative | 721121 - 721888 | 29136.2 |
| atp-dependent rna helicase | DER08_03515 | Not Available | Negative | 721975 - 723867 | 70473.2 |
| non-canonical purine ntp pyrophosphatase | DER08_03520 | Not Available | Negative | 724016 - 724600 | 21448.7 |
| 8-amino-7-oxononanoate synthase | DER08_03525 | Not Available | Positive | 724723 - 725985 | 46841.6 |
| gtp cyclohydrolase | DER08_03530 | Not Available | Negative | 726044 - 727162 | 43786.5 |
| hypothetical protein | DER08_03535 | Not Available | Negative | 727172 - 728122 | 35744.0 |
| duf4834 domain-containing protein | DER08_03540 | Not Available | Positive | 728248 - 728529 | 11112.2 |
| hypothetical protein | DER08_03545 | Not Available | Positive | 728578 - 731007 | 90806.2 |
| glycosyl transferase family 1 | DER08_03550 | Not Available | Positive | 730997 - 732295 | 49381.6 |
| sugar isomerase | DER08_03555 | Not Available | Positive | 732311 - 733774 | 55902.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
