Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine(34) synthase mnma | DER08_03460 | Not Available | Positive | 712802 - 713989 | 44222.0 |
| nitronate monooxygenase | DER08_03465 | Not Available | Positive | 714007 - 714951 | 33879.1 |
| duf4268 domain-containing protein | DER08_03470 | Not Available | Negative | 714971 - 715411 | 17827.2 |
| coenzyme a pyrophosphatase | DER08_03475 | Not Available | Positive | 715504 - 716148 | 24052.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DER08_03480 | Not Available | Positive | 716233 - 717042 | 30964.8 |
| hypothetical protein | DER08_03485 | Not Available | Negative | 717067 - 717672 | 23722.2 |
| rna polymerase subunit sigma-70 | DER08_03490 | Not Available | Negative | 717669 - 718172 | 19810.7 |
| duf3810 domain-containing protein | DER08_03495 | Not Available | Negative | 718245 - 719306 | 42123.3 |
| cytosol nonspecific dipeptidase | DER08_03500 | Not Available | Positive | 719408 - 720871 | 53359.5 |
| hypothetical protein | DER08_03505 | Not Available | Negative | 720931 - 721041 | 4241.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
