Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction resolvase ruvx | DER08_00305 | Not Available | Positive | 65231 - 65647 | 15548.0 |
| malate:quinone oxidoreductase | DER08_00310 | Not Available | Positive | 65772 - 67265 | 55430.9 |
| peptide deformylase | DER08_00315 | Not Available | Positive | 67478 - 68065 | 22478.2 |
| hypothetical protein | DER08_00320 | Not Available | Positive | 68085 - 68543 | 16910.4 |
| nucleoside triphosphate pyrophosphohydrolase | DER08_00325 | Not Available | Positive | 68624 - 69397 | 29935.6 |
| hypothetical protein | DER08_00330 | Not Available | Positive | 69407 - 70279 | 32618.2 |
| hypothetical protein | DER08_00335 | Not Available | Negative | 70260 - 71573 | 51887.2 |
| hypothetical protein | DER08_00340 | Not Available | Positive | 71701 - 72090 | 15349.2 |
| crp/fnr family transcriptional regulator | DER08_00345 | Not Available | Negative | 72111 - 72791 | 25260.9 |
| heavy metal translocating p-type atpase | DER08_00350 | Not Available | Positive | 72904 - 75282 | 88995.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
