Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | DER08_03360 | Not Available | Negative | 691093 - 691947 | 32971.7 |
| duf1543 domain-containing protein | DER08_03365 | Not Available | Negative | 692068 - 692628 | 21226.5 |
| glutamine synthetase | DER08_03370 | Not Available | Negative | 692713 - 693729 | 37873.5 |
| glutamine synthetase type iii | DER08_03375 | Not Available | Positive | 693998 - 696187 | 81975.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | DER08_03380 | Not Available | Positive | 696349 - 697527 | 42861.0 |
| hypothetical protein | DER08_03385 | Not Available | Positive | 697547 - 697903 | 13672.2 |
| hypothetical protein | DER08_03390 | Not Available | Positive | 697936 - 698373 | 17107.2 |
| peptidylprolyl isomerase | DER08_03395 | Not Available | Negative | 698433 - 699638 | 43991.9 |
| peptidylprolyl isomerase | DER08_03400 | Not Available | Negative | 699662 - 700780 | 41094.3 |
| gliding motility-associated peptidyl-prolyl isomerase gldi | DER08_03405 | Not Available | Negative | 700788 - 701411 | 23467.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
