Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase i fole | DER08_03310 | Not Available | Negative | 678695 - 679366 | 25206.2 |
| pyridoxal phosphate-dependent aminotransferase | DER08_03315 | Not Available | Negative | 679533 - 680738 | 44330.2 |
| hypothetical protein | DER08_03320 | Not Available | Negative | 680922 - 681305 | 13711.7 |
| valine--trna ligase | DER08_03325 | Not Available | Positive | 681523 - 684156 | 100227.0 |
| hypothetical protein | DER08_03330 | Not Available | Negative | 684225 - 684776 | 20963.7 |
| tonb-dependent siderophore receptor | DER08_03335 | Not Available | Negative | 684830 - 687232 | 88974.2 |
| hypothetical protein | DER08_03340 | Not Available | Negative | 687425 - 687898 | 18048.4 |
| peptide chain release factor 1 | DER08_03345 | Not Available | Positive | 688139 - 689215 | 40379.9 |
| orotidine-5'-phosphate decarboxylase | DER08_03350 | Not Available | Positive | 689300 - 690112 | 30123.1 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | DER08_03355 | Not Available | Positive | 690150 - 690935 | 30620.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
