Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DER08_03260 | Not Available | Positive | 663212 - 664990 | 67033.6 |
| hypothetical protein | DER08_03265 | Not Available | Positive | 665003 - 665455 | 16511.1 |
| asparagine synthase b | DER08_03270 | Not Available | Positive | 665658 - 667259 | 60549.6 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DER08_03275 | Not Available | Positive | 667444 - 669387 | 72127.0 |
| malate dehydrogenase | DER08_03280 | Not Available | Positive | 669442 - 670377 | 32582.4 |
| protein translocase subunit secdf | DER08_03285 | Not Available | Positive | 670600 - 673572 | 108278.0 |
| s9 family peptidase | DER08_03290 | Not Available | Positive | 673684 - 675792 | 77817.7 |
| prolipoprotein diacylglyceryl transferase | DER08_03295 | Not Available | Negative | 675866 - 676789 | 35167.9 |
| membrane protein insertion efficiency factor yidd | DER08_03300 | Not Available | Negative | 676838 - 677080 | 9079.35 |
| cysteine--trna ligase | DER08_03305 | Not Available | Negative | 677121 - 678599 | 55656.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
