Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl co-a mutase-associated gtpase meab | DER08_03210 | Not Available | Negative | 650676 - 651761 | 39277.0 |
| gdp-mannose pyrophosphatase nudk | DER08_03215 | Not Available | Negative | 651811 - 652392 | 22012.2 |
| glycosyl hydrolase family 5 | DER08_03220 | Not Available | Negative | 652398 - 653417 | 38673.6 |
| adenylosuccinate synthase | DER08_03225 | Not Available | Negative | 653495 - 654766 | 47105.9 |
| transcriptional repressor | DER08_03230 | Not Available | Negative | 654815 - 655273 | 18183.6 |
| rela/spot family protein | DER08_03235 | Not Available | Negative | 655347 - 657566 | 84066.2 |
| rrna methyltransferase | DER08_03240 | Not Available | Negative | 657649 - 658434 | 28444.4 |
| phosphonate abc transporter atp-binding protein | DER08_03245 | Not Available | Negative | 658440 - 659123 | 25388.9 |
| hypothetical protein | DER08_03250 | Not Available | Positive | 659292 - 662300 | 114010.0 |
| phzf family phenazine biosynthesis protein | DER08_03255 | Not Available | Positive | 662305 - 663168 | 32488.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
