Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase | DER08_03110 | Not Available | Positive | 632117 - 632521 | 15652.9 |
| yigz family protein | DER08_03115 | Not Available | Negative | 632542 - 633171 | 23746.8 |
| haloacid dehalogenase | DER08_03120 | Not Available | Negative | 633186 - 633788 | 23230.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DER08_03125 | Not Available | Negative | 633781 - 634824 | 39321.1 |
| gnat family n-acetyltransferase | DER08_03130 | Not Available | Positive | 634927 - 635412 | 18407.3 |
| peptide chain release factor n(5)-glutamine methyltransferase | DER08_03135 | Not Available | Positive | 635423 - 636277 | 32768.5 |
| abc transporter permease | DER08_03140 | Not Available | Negative | 636323 - 637564 | 45106.3 |
| histidine--trna ligase | DER08_03145 | Not Available | Positive | 637724 - 639094 | 50353.6 |
| nucleotide exchange factor grpe | DER08_03150 | Not Available | Positive | 639399 - 639977 | 21579.9 |
| molecular chaperone dnaj | DER08_03155 | Not Available | Positive | 640010 - 641128 | 40219.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
