Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | DER08_03010 | Not Available | Negative | 607115 - 608704 | 60406.3 |
| peptidylprolyl isomerase | DER08_03015 | Not Available | Positive | 609028 - 610458 | 54699.8 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | DER08_03020 | Not Available | Positive | 610776 - 613547 | 100578.0 |
| peptidoglycan endopeptidase | DER08_03025 | Not Available | Positive | 613804 - 615255 | 53102.1 |
| amino acid transporter | DER08_03030 | Not Available | Positive | 615386 - 616795 | 51053.4 |
| alanine dehydrogenase | DER08_03035 | Not Available | Negative | 616857 - 617969 | 39240.0 |
| asnc family transcriptional regulator | DER08_03040 | Not Available | Positive | 618177 - 618638 | 17488.5 |
| serine protease | DER08_03045 | Not Available | Negative | 618687 - 620087 | 51121.9 |
| diaminopimelate epimerase | DER08_03050 | Not Available | Positive | 620222 - 621004 | 28376.5 |
| gnat family n-acetyltransferase | DER08_03055 | Not Available | Positive | 621014 - 621547 | 20440.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
