Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination factor nusg | DER08_02960 | Not Available | Positive | 593578 - 594129 | 20389.0 |
| 50s ribosomal protein l11 | DER08_02965 | Not Available | Positive | 594197 - 594634 | 15322.7 |
| 50s ribosomal protein l1 | DER08_02970 | Not Available | Positive | 594648 - 595337 | 24397.1 |
| 50s ribosomal protein l10 | DER08_02975 | Not Available | Positive | 595360 - 595854 | 17783.3 |
| 50s ribosomal protein l7/l12 | DER08_02980 | Not Available | Positive | 595937 - 596308 | 12608.1 |
| dna-directed rna polymerase subunit beta | DER08_02985 | Not Available | Positive | 596569 - 600381 | 142626.0 |
| dna-directed rna polymerase subunit beta' | DER08_02990 | Not Available | Positive | 600648 - 604955 | 160083.0 |
| duf3467 domain-containing protein | DER08_02995 | Not Available | Positive | 605017 - 605319 | 11046.2 |
| asnc family transcriptional regulator | DER08_03000 | Not Available | Negative | 605351 - 605806 | 17175.2 |
| histidine decarboxylase | DER08_03005 | Not Available | Positive | 605954 - 607114 | 43736.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
