Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyl-amp synthase | DER08_00255 | Not Available | Negative | 55303 - 55869 | 21016.8 |
| hypothetical protein | DER08_00260 | Not Available | Negative | 55877 - 56428 | 21043.3 |
| hypothetical protein | DER08_00265 | Not Available | Negative | 56454 - 57278 | 32315.7 |
| udp-galactopyranose mutase | DER08_00270 | Not Available | Negative | 57291 - 58391 | 42709.4 |
| hypothetical protein | DER08_00275 | Not Available | Negative | 58435 - 60024 | 61547.1 |
| glycosyl transferase | DER08_00280 | Not Available | Negative | 60035 - 61027 | 38841.0 |
| glycosyltransferase family 2 protein | DER08_00285 | Not Available | Negative | 61054 - 62064 | 39302.6 |
| glycosyl transferase family 1 | DER08_00290 | Not Available | Negative | 62046 - 63155 | 42586.2 |
| hypothetical protein | DER08_00295 | Not Available | Negative | 63259 - 64236 | 37670.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DER08_00300 | Not Available | Negative | 64249 - 65064 | 29291.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
