Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | DER08_02910 | Not Available | Positive | 588710 - 589879 | 43781.6 |
| 30s ribosomal protein s21 | DER08_02915 | Not Available | Positive | 589953 - 590147 | 7613.41 |
| integrase | DER08_02920 | Not Available | Positive | 590219 - 591115 | 34447.7 |
| ribosome-associated translation inhibitor raia | DER08_02925 | Not Available | Positive | 591148 - 591450 | 11711.2 |
| Trna-thr | Not Available | Not Available | Positive | 591543 - 591619 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 591651 - 591734 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 591908 - 591982 | Not Available |
| elongation factor tu | DER08_02945 | Not Available | Positive | 592037 - 593221 | 43072.8 |
| Trna-trp | Not Available | Not Available | Positive | 593283 - 593356 | Not Available |
| preprotein translocase subunit sece | DER08_02955 | Not Available | Positive | 593370 - 593567 | 7326.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
