Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine--trna ligase | DER08_02760 | Not Available | Positive | 551778 - 554417 | 98191.5 |
| hypothetical protein | DER08_02765 | Not Available | Negative | 554467 - 554853 | 14557.4 |
| gscfa domain-containing protein | DER08_02770 | Not Available | Positive | 554957 - 555910 | 36584.7 |
| threonine dehydratase | DER08_02775 | Not Available | Negative | 555911 - 557155 | 45738.1 |
| duf4136 domain-containing protein | DER08_02780 | Not Available | Negative | 557254 - 557793 | 20401.5 |
| hypothetical protein | DER08_02785 | Not Available | Negative | 557854 - 558033 | 7068.36 |
| 1-aminocyclopropane-1-carboxylate deaminase | DER08_02790 | Not Available | Positive | 558135 - 559031 | 33268.0 |
| hemagglutinin | DER08_02795 | Not Available | Positive | 559024 - 559827 | 29906.6 |
| glutamate-1-semialdehyde-2,1-aminomutase | DER08_02800 | Not Available | Positive | 559846 - 561132 | 45799.2 |
| hypothetical protein | DER08_02805 | Not Available | Negative | 561184 - 561615 | 16948.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
