Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short chain dehydrogenase | DER08_02710 | Not Available | Positive | 543426 - 544214 | 28523.9 |
| hypothetical protein | DER08_02715 | Not Available | Negative | 544232 - 544723 | 18387.4 |
| tonb-dependent receptor | DER08_02720 | Not Available | Negative | 544851 - 547421 | 93665.4 |
| rrf2 family transcriptional regulator | DER08_02725 | Not Available | Negative | 547643 - 548056 | 15204.7 |
| methanol dehydrogenase | DER08_02730 | Not Available | Negative | 548112 - 548912 | 27717.4 |
| hypothetical protein | DER08_02735 | Not Available | Negative | 548912 - 549349 | 16343.2 |
| lema family protein | DER08_02740 | Not Available | Negative | 549369 - 549962 | 21682.7 |
| hypothetical protein | DER08_02745 | Not Available | Negative | 550012 - 550290 | 10584.6 |
| transcriptional regulator | DER08_02750 | Not Available | Negative | 550293 - 550625 | 12669.4 |
| peptidase m23 | DER08_02755 | Not Available | Negative | 550625 - 551602 | 36898.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
