Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | DER08_02655 | Not Available | Positive | 532520 - 533191 | 25867.0 |
| tonb-dependent receptor | DER08_02660 | Not Available | Positive | 533196 - 535538 | 86561.2 |
| hypothetical protein | DER08_02665 | Not Available | Positive | 535588 - 536550 | 33793.9 |
| hypothetical protein | DER08_02670 | Not Available | Positive | 536540 - 537181 | 25134.9 |
| hypothetical protein | DER08_02675 | Not Available | Positive | 537178 - 538164 | 38417.4 |
| dna-binding response regulator | DER08_02680 | Not Available | Positive | 538161 - 538916 | 29121.1 |
| polysaccharide deacetylase | DER08_02685 | Not Available | Positive | 538930 - 539865 | 35901.8 |
| Trna-met | Not Available | Not Available | Positive | 540053 - 540128 | Not Available |
| gtpase era | DER08_02695 | Not Available | Positive | 540247 - 541128 | 33559.7 |
| ribosome biogenesis gtpase der | DER08_02700 | Not Available | Positive | 541280 - 542590 | 49581.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
