Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_02605 | Not Available | Negative | 522976 - 524094 | 42710.8 |
| abc transporter permease | DER08_02610 | Not Available | Negative | 524363 - 525487 | 42735.2 |
| multidrug abc transporter permease | DER08_02615 | Not Available | Negative | 525508 - 526614 | 41587.5 |
| abc transporter | DER08_02620 | Not Available | Negative | 526639 - 527373 | 27192.0 |
| atpase | DER08_02625 | Not Available | Negative | 527377 - 528288 | 34279.3 |
| hlyd family secretion protein | DER08_02630 | Not Available | Negative | 528290 - 529165 | 32452.3 |
| tolc family protein | DER08_02635 | Not Available | Negative | 529188 - 530438 | 46819.6 |
| tetr/acrr family transcriptional regulator | DER08_02640 | Not Available | Negative | 530435 - 531028 | 22665.8 |
| yhyh protein | DER08_02645 | Not Available | Positive | 531250 - 532011 | 27426.1 |
| hypothetical protein | DER08_02650 | Not Available | Positive | 532012 - 532581 | 21994.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
