Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_00205 | Not Available | Negative | 44440 - 46266 | 66829.1 |
| hypothetical protein | DER08_00210 | Not Available | Positive | 46376 - 47440 | 42186.5 |
| nucleoid-associated protein | DER08_00215 | Not Available | Negative | 47577 - 48635 | 41669.0 |
| hypothetical protein | DER08_00220 | Not Available | Negative | 48740 - 49279 | 20847.7 |
| histidine kinase | DER08_00225 | Not Available | Positive | 49568 - 50902 | 51721.7 |
| histidine kinase | DER08_00230 | Not Available | Positive | 50923 - 51240 | 12541.4 |
| dna-binding response regulator | DER08_00235 | Not Available | Positive | 51265 - 52020 | 29117.9 |
| cdp-alcohol phosphatidyltransferase | DER08_00240 | Not Available | Negative | 52021 - 52791 | 28944.7 |
| heme a synthase | DER08_00245 | Not Available | Negative | 52834 - 53850 | 38546.0 |
| trna nucleotidyltransferase | DER08_00250 | Not Available | Negative | 53853 - 55271 | 53785.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
