Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DER08_02405 | Not Available | Positive | 478361 - 479443 | 38354.9 |
| multidrug transporter acrb | DER08_02410 | Not Available | Positive | 479516 - 482707 | 118228.0 |
| hypothetical protein | DER08_02415 | Not Available | Positive | 482726 - 483031 | 11393.5 |
| duf2892 domain-containing protein | DER08_02420 | Not Available | Positive | 483049 - 483234 | 6917.63 |
| hypothetical protein | DER08_02425 | Not Available | Negative | 483306 - 483497 | 7354.52 |
| sulfide:quinone reductase | DER08_02430 | Not Available | Negative | 483476 - 484942 | 54134.1 |
| sam-dependent methyltransferase | DER08_02435 | Not Available | Negative | 485167 - 485763 | 22789.8 |
| crp/fnr family transcriptional regulator | DER08_02440 | Not Available | Negative | 485833 - 486462 | 24252.7 |
| ribulose-phosphate 3-epimerase | DER08_02445 | Not Available | Negative | 486552 - 487214 | 23734.8 |
| rna polymerase subunit sigma | DER08_02450 | Not Available | Negative | 487265 - 488128 | 32889.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
