Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DER08_02305 | Not Available | Negative | 450927 - 452018 | 39350.9 |
| hypothetical protein | DER08_02310 | Not Available | Negative | 452088 - 452996 | 31370.8 |
| hypothetical protein | DER08_02315 | Not Available | Negative | 453036 - 454601 | 55706.6 |
| ragb/susd family nutrient uptake outer membrane protein | DER08_02320 | Not Available | Negative | 454653 - 456161 | 54987.9 |
| susc/raga family tonb-linked outer membrane protein | DER08_02325 | Not Available | Negative | 456176 - 459295 | 112600.0 |
| regulator | DER08_02330 | Not Available | Positive | 459577 - 462447 | 110808.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DER08_02335 | Not Available | Negative | 462468 - 463751 | 47658.9 |
| gliding motility lipoprotein gldj | DER08_02340 | Not Available | Negative | 463815 - 465500 | 63921.9 |
| hypothetical protein | DER08_02345 | Not Available | Positive | 465869 - 467038 | 43146.1 |
| cytidine deaminase | DER08_02350 | Not Available | Positive | 467110 - 467592 | 17589.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
