Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | DER08_02155 | Not Available | Negative | 418512 - 419084 | 21135.0 |
| hypoxanthine phosphoribosyltransferase | DER08_02160 | Not Available | Negative | 419125 - 419655 | 19732.9 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DER08_02165 | Not Available | Positive | 419839 - 420990 | 42971.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DER08_02170 | Not Available | Positive | 421092 - 421577 | 16690.5 |
| peptidase m3 | DER08_02175 | Not Available | Positive | 421675 - 423702 | 76797.8 |
| aminoglycoside phosphotransferase family protein | DER08_02180 | Not Available | Negative | 423819 - 424862 | 39948.9 |
| nucleotidyltransferase | DER08_02185 | Not Available | Negative | 424853 - 425776 | 34493.5 |
| glycosyl hydrolase | DER08_02190 | Not Available | Negative | 425763 - 427160 | 53151.2 |
| hypothetical protein | DER08_02195 | Not Available | Negative | 427209 - 427955 | 29143.2 |
| glycine dehydrogenase (aminomethyl-transferring) | DER08_02200 | Not Available | Positive | 428134 - 430977 | 103535.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
