Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l2 | DER08_02055 | Not Available | Negative | 397324 - 398148 | 29866.3 |
| 50s ribosomal protein l23 | DER08_02060 | Not Available | Negative | 398158 - 398448 | 10771.1 |
| 50s ribosomal protein l4 | DER08_02065 | Not Available | Negative | 398457 - 399086 | 22970.5 |
| 50s ribosomal protein l3 | DER08_02070 | Not Available | Negative | 399086 - 399703 | 22027.8 |
| 30s ribosomal protein s10 | DER08_02075 | Not Available | Negative | 399862 - 400167 | 11425.3 |
| elongation factor g | DER08_02080 | Not Available | Negative | 400179 - 402335 | 79204.6 |
| 30s ribosomal protein s7 | DER08_02085 | Not Available | Negative | 402347 - 402823 | 18416.6 |
| 30s ribosomal protein s12 | DER08_02090 | Not Available | Negative | 402899 - 403282 | 14091.2 |
| susc/raga family tonb-linked outer membrane protein | DER08_02095 | Not Available | Positive | 403774 - 406965 | 114715.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DER08_02100 | Not Available | Positive | 406989 - 408638 | 60487.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
