Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | DER08_01955 | Not Available | Negative | 388738 - 389112 | 13904.1 |
| 50s ribosomal protein l36 | DER08_01960 | Not Available | Negative | 389115 - 389231 | 4543.8 |
| translation initiation factor if-1 | DER08_01965 | Not Available | Negative | 389246 - 389461 | 8109.01 |
| preprotein translocase subunit secy | DER08_01970 | Not Available | Negative | 389465 - 390811 | 49084.1 |
| 50s ribosomal protein l15 | DER08_01975 | Not Available | Negative | 390824 - 391276 | 15994.3 |
| 50s ribosomal protein l30 | DER08_01980 | Not Available | Negative | 391288 - 391470 | 6663.47 |
| 30s ribosomal protein s5 | DER08_01985 | Not Available | Negative | 391485 - 392009 | 18277.2 |
| 50s ribosomal protein l18 | DER08_01990 | Not Available | Negative | 392016 - 392366 | 12549.3 |
| 50s ribosomal protein l6 | DER08_01995 | Not Available | Negative | 392378 - 392920 | 19475.7 |
| 30s ribosomal protein s8 | DER08_02000 | Not Available | Negative | 392939 - 393337 | 14647.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
