Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_00155 | Not Available | Negative | 31222 - 31716 | 18018.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DER08_00160 | Not Available | Negative | 31769 - 33082 | 49548.6 |
| transporter | DER08_00165 | Not Available | Negative | 33293 - 34795 | 55549.4 |
| hypothetical protein | DER08_00170 | Not Available | Negative | 34851 - 35828 | 36848.0 |
| proline--trna ligase | DER08_00175 | Not Available | Positive | 35931 - 37409 | 56123.9 |
| Trna-glu | Not Available | Not Available | Positive | 37488 - 37562 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 37606 - 37680 | Not Available |
| 30s ribosomal protein s20 | DER08_00190 | Not Available | Positive | 37840 - 38091 | 9374.61 |
| translational gtpase typa | DER08_00195 | Not Available | Positive | 38234 - 40030 | 67142.2 |
| gliding motility protein | DER08_00200 | Not Available | Negative | 40103 - 44416 | 155756.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
