Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-binding protein | DER08_01905 | Not Available | Negative | 379473 - 379838 | 13405.4 |
| amidinotransferase | DER08_01910 | Not Available | Negative | 379901 - 380842 | 35292.0 |
| amidinotransferase | DER08_01915 | Not Available | Negative | 380867 - 381799 | 35980.2 |
| citrate (si)-synthase | DER08_01920 | Not Available | Negative | 381879 - 383150 | 47327.9 |
| phosphopyruvate hydratase | DER08_01925 | Not Available | Negative | 383309 - 384601 | 46049.8 |
| carbamoyl phosphate synthase small subunit | DER08_01930 | Not Available | Negative | 384844 - 385944 | 40281.8 |
| 50s ribosomal protein l17 | DER08_01935 | Not Available | Negative | 386093 - 386596 | 18496.3 |
| dna-directed rna polymerase subunit alpha | DER08_01940 | Not Available | Negative | 386634 - 387626 | 37331.8 |
| 30s ribosomal protein s4 | DER08_01945 | Not Available | Negative | 387648 - 388253 | 22895.6 |
| 30s ribosomal protein s11 | DER08_01950 | Not Available | Negative | 388346 - 388729 | 13689.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
