Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | DER08_01855 | Not Available | Negative | 367876 - 368994 | 41807.6 |
| lipopolysaccharide biosynthesis protein | DER08_01860 | Not Available | Negative | 369028 - 370092 | 38890.7 |
| nucleotide sugar dehydrogenase | DER08_01865 | Not Available | Negative | 370198 - 371493 | 47398.1 |
| sugar transporter | DER08_01870 | Not Available | Negative | 371530 - 373974 | 89903.5 |
| mannose-1-phosphate guanylyltransferase | DER08_01875 | Not Available | Negative | 374037 - 375038 | 37130.2 |
| glycerol-3-phosphate cytidylyltransferase | DER08_01880 | Not Available | Negative | 375103 - 375534 | 16555.8 |
| dna methylase | DER08_01885 | Not Available | Positive | 376244 - 376636 | 15793.2 |
| antitermination protein nusg | DER08_01890 | Not Available | Negative | 376868 - 377332 | 18005.9 |
| nucleotide sugar dehydrogenase | DER08_01895 | Not Available | Negative | 377394 - 378785 | 50953.8 |
| recombination protein recr | DER08_01900 | Not Available | Negative | 378816 - 379436 | 22846.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
