Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase wbub | DER08_01700 | Not Available | Negative | 334079 - 335260 | 44947.4 |
| heparinase | DER08_01705 | Not Available | Negative | 335257 - 336879 | 62642.9 |
| dehydrogenase | DER08_01710 | Not Available | Negative | 336916 - 339027 | 76752.7 |
| hypothetical protein | DER08_01715 | Not Available | Negative | 339070 - 340101 | 40208.8 |
| imidazole glycerol phosphate synthase subunit hisf | DER08_01720 | Not Available | Negative | 340138 - 340911 | 28419.9 |
| imidazole glycerol phosphate synthase subunit hish | DER08_01725 | Not Available | Negative | 340911 - 341525 | 22703.4 |
| lps biosynthesis protein | DER08_01730 | Not Available | Negative | 341522 - 342658 | 44163.2 |
| hypothetical protein | DER08_01735 | Not Available | Negative | 342668 - 343780 | 42817.4 |
| hypothetical protein | DER08_01740 | Not Available | Negative | 343860 - 344540 | 25649.0 |
| hypothetical protein | DER08_01745 | Not Available | Negative | 345214 - 346377 | 45205.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
