Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-arabinose 5-phosphate isomerase | DER08_01600 | Not Available | Positive | 317034 - 317957 | 33312.8 |
| twin-arginine translocase subunit tatc | DER08_01605 | Not Available | Positive | 317957 - 318772 | 30854.6 |
| carboxymuconolactone decarboxylase family protein | DER08_01610 | Not Available | Positive | 318765 - 319112 | 13047.7 |
| lps export abc transporter atp-binding protein | DER08_01615 | Not Available | Positive | 319165 - 319905 | 27368.3 |
| hypothetical protein | DER08_01620 | Not Available | Positive | 319918 - 320145 | 8919.83 |
| phosphatidylserine synthase | DER08_01625 | Not Available | Negative | 320151 - 320882 | 26802.6 |
| hypothetical protein | DER08_01630 | Not Available | Negative | 320872 - 321054 | 6805.06 |
| hypothetical protein | DER08_01635 | Not Available | Positive | 321056 - 322177 | 42616.8 |
| hypothetical protein | DER08_01640 | Not Available | Negative | 322207 - 323088 | 34184.5 |
| membrane-bound o-acyltransferase family protein | DER08_01645 | Not Available | Negative | 323088 - 324521 | 55732.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
