Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-70 | DER08_01450 | Not Available | Positive | 285386 - 285955 | 22388.0 |
| hypothetical protein | DER08_01455 | Not Available | Positive | 285942 - 286625 | 25147.9 |
| hypothetical protein | DER08_01460 | Not Available | Positive | 286662 - 287840 | 45142.8 |
| hypothetical protein | DER08_01465 | Not Available | Positive | 287933 - 288994 | 40803.2 |
| 23s rrna pseudouridine(2604) synthase rluf | DER08_01470 | Not Available | Positive | 289232 - 290041 | 31225.8 |
| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase | DER08_01475 | Not Available | Negative | 290207 - 291088 | 32037.9 |
| signal recognition particle protein | DER08_01480 | Not Available | Negative | 291214 - 292572 | 49707.0 |
| arginine--trna ligase | DER08_01485 | Not Available | Negative | 292724 - 294502 | 66767.9 |
| 3-oxoacyl-acp synthase | DER08_01490 | Not Available | Negative | 294658 - 295665 | 36779.8 |
| abc transporter atp-binding protein | DER08_01495 | Not Available | Negative | 295746 - 296678 | 35011.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
