Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4295 domain-containing protein | DER08_00105 | Not Available | Positive | 20813 - 20965 | 5488.88 |
| signal recognition particle-docking protein ftsy | DER08_00110 | Not Available | Positive | 21093 - 22073 | 35347.4 |
| hypothetical protein | DER08_00115 | Not Available | Positive | 22258 - 22701 | 17007.2 |
| duf721 domain-containing protein | DER08_00120 | Not Available | Positive | 22682 - 22978 | 11054.5 |
| nucleoside-diphosphate kinase | DER08_00125 | Not Available | Negative | 23134 - 23553 | 14911.7 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | DER08_00130 | Not Available | Negative | 23648 - 25237 | 61169.7 |
| mfs transporter | DER08_00135 | Not Available | Positive | 25354 - 26631 | 46604.8 |
| radical sam protein | DER08_00140 | Not Available | Positive | 26679 - 28877 | 83505.8 |
| porin | DER08_00145 | Not Available | Positive | 29322 - 30311 | 34909.1 |
| n-acetylmuramoyl-l-alanine amidase | DER08_00150 | Not Available | Negative | 30404 - 31207 | 30260.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
