Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-70 | DER08_01405 | Not Available | Positive | 277744 - 278295 | 21457.7 |
| lipoyl synthase | DER08_01410 | Not Available | Positive | 278387 - 279256 | 32958.0 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 278936 - 279033 | Not Available |
| type i glyceraldehyde-3-phosphate dehydrogenase | DER08_01415 | Not Available | Positive | 279267 - 280271 | 36559.1 |
| tetraacyldisaccharide 4'-kinase | DER08_01420 | Not Available | Negative | 280273 - 281283 | 37970.5 |
| hypothetical protein | DER08_01425 | Not Available | Negative | 281324 - 281578 | 9413.31 |
| hypothetical protein | DER08_01430 | Not Available | Negative | 281670 - 282398 | 27684.1 |
| nif3-like dinuclear metal center hexameric protein | DER08_01435 | Not Available | Positive | 282495 - 283589 | 40778.2 |
| hypothetical protein | DER08_01440 | Not Available | Positive | 283593 - 284372 | 29932.7 |
| alpha/beta hydrolase | DER08_01445 | Not Available | Positive | 284410 - 285252 | 32162.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
