Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | DER08_01355 | Not Available | Negative | 267859 - 268704 | 32191.7 |
| rhomboid family intramembrane serine protease | DER08_01360 | Not Available | Negative | 268734 - 269480 | 27964.4 |
| dna mismatch repair endonuclease mutl | DER08_01365 | Not Available | Negative | 269477 - 271339 | 69425.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | DER08_01370 | Not Available | Negative | 271593 - 272165 | 21066.1 |
| hypothetical protein | DER08_01375 | Not Available | Negative | 272283 - 273056 | 27983.9 |
| dna replication and repair protein recf | DER08_01380 | Not Available | Positive | 273198 - 274277 | 41529.8 |
| rhodanese-like domain-containing protein | DER08_01385 | Not Available | Positive | 274344 - 274751 | 15151.2 |
| tigr02453 family protein | DER08_01390 | Not Available | Positive | 274796 - 275473 | 26471.3 |
| udp-n-acetylenolpyruvoylglucosamine reductase | DER08_01395 | Not Available | Positive | 275510 - 276523 | 37787.0 |
| glycosyl transferase family 2 | DER08_01400 | Not Available | Positive | 276650 - 277753 | 42346.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
