Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf493 domain-containing protein | DER08_01210 | Not Available | Negative | 245466 - 245762 | 11201.4 |
| atpase | DER08_01215 | Not Available | Positive | 245911 - 246450 | 20758.8 |
| recq family atp-dependent dna helicase | DER08_01220 | Not Available | Positive | 246514 - 248409 | 72145.0 |
| methionyl-trna formyltransferase | DER08_01225 | Not Available | Positive | 248409 - 249356 | 34802.1 |
| dna-binding protein | DER08_01230 | Not Available | Positive | 249536 - 249808 | 9215.12 |
| transcriptional regulator | DER08_01235 | Not Available | Positive | 249924 - 250484 | 21033.0 |
| aminotransferase class iv | DER08_01240 | Not Available | Negative | 250481 - 251314 | 31324.8 |
| hypothetical protein | DER08_01245 | Not Available | Negative | 251366 - 251758 | 15183.6 |
| Trna-met | Not Available | Not Available | Positive | 251909 - 251985 | Not Available |
| transcriptional regulator | DER08_01255 | Not Available | Positive | 252242 - 252568 | 11807.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
