Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family peptidase | DER08_01160 | Not Available | Negative | 235974 - 237668 | 63903.7 |
| hypothetical protein | DER08_01165 | Not Available | Positive | 237850 - 238140 | 10999.2 |
| cell division protein zapa | DER08_01170 | Not Available | Positive | 238146 - 238439 | 11133.3 |
| ribonuclease y | DER08_01175 | Not Available | Positive | 238648 - 240213 | 57858.9 |
| site-specific tyrosine recombinase xerd | DER08_01180 | Not Available | Negative | 240274 - 241173 | 34654.6 |
| port family protein | DER08_01185 | Not Available | Positive | 241358 - 241927 | 20467.7 |
| 3-dehydroquinate dehydratase | DER08_01190 | Not Available | Positive | 242002 - 242415 | 15047.9 |
| cation-efflux pump | DER08_01195 | Not Available | Negative | 242464 - 243339 | 32055.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DER08_01200 | Not Available | Negative | 243429 - 244742 | 47434.0 |
| duf4290 domain-containing protein | DER08_01205 | Not Available | Negative | 244743 - 245462 | 28022.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
