Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene synthase | DER08_01055 | Not Available | Negative | 212107 - 212946 | 32228.7 |
| phytoene desaturase | DER08_01060 | Not Available | Negative | 212948 - 214423 | 55398.0 |
| merr family transcriptional regulator | DER08_01065 | Not Available | Negative | 214444 - 215343 | 35153.0 |
| carbamoyl-phosphate synthase large subunit | DER08_01070 | Not Available | Negative | 215503 - 218358 | 105770.0 |
| 50s ribosomal protein l34 | DER08_01075 | Not Available | Negative | 218517 - 218678 | 6301.82 |
| hypothetical protein | DER08_01080 | Not Available | Positive | 218845 - 219360 | 19614.6 |
| excinuclease abc subunit c | DER08_01085 | Not Available | Negative | 219421 - 219741 | 12749.1 |
| murein transglycosylase | DER08_01090 | Not Available | Negative | 219844 - 220749 | 34065.4 |
| alpha/beta hydrolase | DER08_01095 | Not Available | Negative | 220777 - 221415 | 24170.8 |
| glycosyl transferase family 2 | DER08_01100 | Not Available | Negative | 221537 - 223171 | 61261.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
