Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4252 domain-containing protein | DER08_00955 | Not Available | Negative | 194087 - 194608 | 19462.9 |
| peptidase s41 | DER08_00960 | Not Available | Positive | 194747 - 196207 | 53922.0 |
| tonb-dependent receptor | DER08_00965 | Not Available | Negative | 196270 - 198225 | 72574.0 |
| abc transporter substrate-binding protein | DER08_00970 | Not Available | Positive | 198603 - 199745 | 42843.5 |
| iron abc transporter | DER08_00975 | Not Available | Positive | 199747 - 200778 | 36455.3 |
| abc transporter atp-binding protein | DER08_00980 | Not Available | Positive | 200778 - 201563 | 28992.4 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | DER08_00985 | Not Available | Negative | 201569 - 202024 | 17039.5 |
| pseudouridine synthase | DER08_00990 | Not Available | Negative | 202029 - 202607 | 22110.9 |
| dna recombination protein rmuc | DER08_00995 | Not Available | Positive | 202720 - 204054 | 50915.2 |
| acyl-coa thioesterase | DER08_01000 | Not Available | Positive | 204054 - 204602 | 20202.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
