Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | DER08_09660 | Not Available | Negative | 2078776 - 2080122 | 50384.4 |
| tetr/acrr family transcriptional regulator | DER08_09665 | Not Available | Negative | 2080130 - 2080726 | 22984.9 |
| polyprenyl synthetase | DER08_09670 | Not Available | Positive | 2080907 - 2081881 | 36342.5 |
| hypothetical protein | DER08_09675 | Not Available | Positive | 2081874 - 2082242 | 14388.2 |
| hypothetical protein | DER08_09680 | Not Available | Negative | 2082246 - 2082794 | 20218.3 |
| 2-oxoglutarate dehydrogenase e1 component | DER08_09685 | Not Available | Positive | 2082915 - 2085686 | 104877.0 |
| dihydrolipoyllysine-residue succinyltransferase | DER08_09690 | Not Available | Positive | 2085714 - 2086937 | 43369.3 |
| tetracycline resistance mfs efflux pump | DER08_09695 | Not Available | Positive | 2087043 - 2088257 | 44141.1 |
| hydrolase tatd | DER08_09700 | Not Available | Positive | 2088277 - 2089044 | 29091.8 |
| glycerol acyltransferase | DER08_09705 | Not Available | Positive | 2089108 - 2090244 | 43453.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
