Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit f | DER08_09610 | Not Available | Negative | 2067005 - 2068372 | 50270.1 |
| nad(p)h-dependent oxidoreductase subunit e | DER08_09615 | Not Available | Negative | 2068374 - 2068904 | 20254.6 |
| nadh-quinone oxidoreductase subunit d | DER08_09620 | Not Available | Negative | 2068908 - 2070143 | 47192.6 |
| nadh-quinone oxidoreductase subunit c | DER08_09625 | Not Available | Negative | 2070176 - 2070697 | 20387.2 |
| nadh-quinone oxidoreductase subunit b | DER08_09630 | Not Available | Negative | 2070702 - 2071250 | 19990.3 |
| nadh-quinone oxidoreductase subunit a | DER08_09635 | Not Available | Negative | 2071291 - 2071656 | 13812.4 |
| cold-shock protein | DER08_09640 | Not Available | Negative | 2071901 - 2072095 | 7055.25 |
| aspartate--trna ligase | DER08_09645 | Not Available | Negative | 2072221 - 2073975 | 66079.1 |
| copper transporter | DER08_09650 | Not Available | Negative | 2074100 - 2077573 | 129580.0 |
| efflux rnd transporter periplasmic adaptor subunit | DER08_09655 | Not Available | Negative | 2077600 - 2078742 | 41461.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
