Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photolyase | DER08_09510 | Not Available | Positive | 2044725 - 2046233 | 59857.4 |
| duf2256 domain-containing protein | DER08_09515 | Not Available | Positive | 2046199 - 2046345 | 5989.42 |
| cryptochrome/photolyase family protein | DER08_09520 | Not Available | Positive | 2046417 - 2047952 | 59992.8 |
| cryptochrome dash | DER08_09525 | Not Available | Positive | 2047949 - 2049244 | 50520.5 |
| duf2452 domain-containing protein | DER08_09530 | Not Available | Negative | 2049246 - 2049656 | 15643.3 |
| transcriptional regulator | DER08_09535 | Not Available | Negative | 2049752 - 2050744 | 38205.5 |
| galactose-1-epimerase | DER08_09540 | Not Available | Positive | 2050847 - 2051890 | 38483.4 |
| arabinogalactan endo-1,4-beta-galactosidase | DER08_09545 | Not Available | Positive | 2051928 - 2052947 | 38096.2 |
| galactokinase | DER08_09550 | Not Available | Positive | 2053001 - 2054170 | 43415.9 |
| galactose-1-phosphate uridylyltransferase | DER08_09555 | Not Available | Positive | 2054171 - 2055220 | 40842.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
